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Post Genome Project Era Proteomics R&D Competition


Description: Proteomics is projected to grow from a $565 million market in 2001 to over $3.3 billion in 2006. This represents an average annual rate of growth of over 40%. The fastest growing segment of the proteomics market is expected to be the protein chip segment that will increase from $65.7 million in 2001 to over $723 million in 2006. This represents a 11-fold increase in market size in a six-year period and an average annual growth rate approaching 62%. Demand for proteomics services is expected to be strong throughout this time period with an average annual growth rate of over 50%. The rate of growth in this market segment is expected to slow after 2004 when next generation proteomics platforms are introduced. The proteomics platform market segment will remain the largest with a growth from $311 million in 2001 to approximately $1.7 billion in 2006. Following the release of the first full draft of the human genome, the spotlight in biomedical research is shifting from genomics to proteomics as the key technology to transform information into pharmaceutical products. The need to improve the speed and efficiency of drug discovery is the primary driver of proteomics. Current step-wise screening and chemical optimization methods are both time-consuming (averaging 10-12 years from discovery to market) and expensive (estimated costs range from $500M-$750M). In addition, there is a high rate of failure in the clinical trials process due to toxicity or low efficacy of selected drug targets resulting in an increased interest in identification of biomarkers suitable to use in therapeutic planning and individualized medicine. It is hoped that both the rate of drug development and the rate of discovery of novel, informative biomarkers will dramatically improve using emerging proteomics platforms. The use of proteomics capabilities has the potential to decrease overall spending per new chemical compound by approximately 30%, while decreasing the time investment by two years. The reality is that genomic technologies (use of DNA arrays and mRNA profiling) have resulted in a bottleneck in target validation. In order to realize the potential for efficiency, both genomics and proteomics need to be leveraged by applying these tools throughout validation to result in suitable and validated targets. This will require the construction of a systems biology framework to understand on a molecular level the disease mechanisms that often involve multiple targets and pathways. All major pharmaceutical companies are searching for ways of accelerating drug discoveries. An important strategy to increase efficiency and reduce attrition in discovery is the ability to develop new drugs in parallel with disease biomarkers. With decreasing numbers of drugs in the clinical pipeline, Pharma (the pharmaceutical industry) is actively evaluating methods to increase the return on their R&D dollars by raising R&D productivity. Proteomics offers a clearer path toward this than genomics for several reasons. First, the same proteomics platforms can be used to test multiple biochemical properties. When the same target screen positive in multiple tests, it increases confidence in the role of that target in the disease of interest. Second, proteomics targets the biomolecules responsible for disease directly while genomics measures the levels of the messages encoding them, an indirect measurement of correlation. Third, proteomics platforms that are used in R&D for discovering drug targets can also be used in upstream in both pre-clinical R&D and post-clinical development. For example, the same tests on proteomic chips are being applied to in drug discovery, target validation, biomarker studies and drug candidate evaluation. Similarly, the hybrid sample preparation/MS analysis platforms under active development by several proteomics platform providers can be used both in discovery and in screening all the way through manufacturing QC to test product purity.


Contents: 1. Executive Overview

2. The Market Overview For Proteomics In Pharmaceutical R&D

Definition Of Proteomics Market
Recent Industry Trends That Impact Proteomics Market


3. Current Proteomics Market Participants By Market Segment

Technologies Used In Proteomics

Emerging Proteomics Technologies
Proteomics Chip Providers
Proteomics Platform Providers
Reagent or Antibody Providers
Proteomics Informatics Tools and Database Providers
Proteomic Service Providers
Proteomics-based Drug Discovery Companies
The Drug Development Process


4. Drivers Of Proteomics Market

Pharmaceutical Drug Discovery R&D
Japan To Play Key Role In 'Golden Age Of Discovery
Genomics Contribution To Drug Development

Need For Systems Approach To Biological Research

Limitations of DNA Chips and Expression Profiling
Technical Challenges With Protein Chips
Post Human Genome Project Era Proteomics Databases


5. Case Studies In Proteomic Platforms For Pharmaceutical R&D

Collaborative Landscape In Proteomics: Strategic Alliances And Partnerships

Strategic Alliances In The Proteomics Market Segments

Alliances with Platform Providers
Alliances with Proteomics Arrays or Protein Chips
Alliances with Informatics and Database Providers
Alliances with Proteomic Reagent Providers
Alliances with Proteomic Service Providers

Recent Key Strategic Alliances And Partnerships

Applied Biosystems & HTS Biosystems: An R&D and marketing collaboration
Bruker Daltonics & Roche: Platform development collaboration
Celera & SomaLogic: Technology access collaboration
Ciphergen & Beckman Coulter: Robotic upgrade to leading platform
Correlogic & Ciphergen: Diagnostic discovery collaboration
Gyros & Affibody: Technology development strategic alliance
MDS Proteomics & Thermo Finnigan: Platform development collaboration
NeoGenesis & Mass General Hospital: Clinical collaboration
Phylos & Upstate: Reagent development collaboration
Large Scale Biology & NIEHS: Academic research collaboration
Oxford GlycoSciences & BioInvent: Drug-discovery collaboration
Proteome Systems & Itochu: An international joint venture


6. Drug Discovery Pipeline Engaging Proteomics

7. Future Outlook For Proteomics Market

Forecast For Proteomics By Market Segments

Platform Provider Market Segment
Protein Chip Provider Segment
Informatics Provider Market Segment
Reagent Provider Market Segment
Services Provider Market Segment
Comparison of the Market Segment Forecasts
Proteomics Market Size by Segment, 2002~2006

Total Size Of The Proteomics Market


8. Future Directions In Proteomics

Overview Of Past Trends
Recent Developments In Genomics That Impact Proteomics
Indicators Of Future Trends In Proteomics


9. Company Profiles

Protein Chip Providers

Aspira Biosystems
BioForce Nanosciences
Biosite Discovery
Glaucus Proteomics
Milagen, Inc.
Phylos
Protometrix

Platform Providers

20/20 GeneSystems, Inc
Agilent Technologies
Applied Biosystems
Biacore AB
Ciphergen
CombiMatrix
HTS Biosystems
Kinexus
Large Scale Biology
Perkin-Elmer, Inc.
Prolinx
Proteome Systems Ltd.
Randox
SomaLogic
Zeptosens
Zyomyx, Inc.

Reagent Providers

Bioinvent
Cambridge Antibody Technology
LYNX
Upstate

Services Providers

Affinium Pharmaceuticals
GeneProt
Protagen AG
Syrrx

Informatics And Database Providers

AxCell Biosciences
Compugen
GeneFormatics
InforMax
Iconix Pharmaceuticals
LabVantage Solutions
Matrix Science
Nonlinear Dynamics
ProteoMetrics

Proteomics-Based Drug Discovery Companies

ACE BioSciences
Archemix
Beyond Genomics
Celera Genomics
MDS Proteomics, Inc.
NeoGenesis Pharmaceuticals, Inc.
Oxford GlycoSciences


10. Lessons Learned And Emerging Opportunities

Genomics Companies Restructure And Focus On Proteomics
Challenges Of Drug Discovery R&D Process
Next Hot Development Areas In Proteomics
Proteomics Opportunities

Role In Drug Discovery

Role in Toxicology and Toxicogenomics
Role in Basic Research

Large-Scale Proteomics Takes Off


11.Summary

Appendix A - Listing Of Proteomics Vendors

Appendix B - Proteomics Glossary

2D-gel electrophoresis
activity based proteomics
antibody chips
carbohydrate chips
cell chips/ microarrays
cell-based drug discovery
cellular proteome
chemical chips/ microarrays
chemical genetics
chemical proteomics
computational proteomics
compound validation
functional proteomics
functional protein arrays
high-throughput proteomics
Human Proteome Organization (HUPO)
Human Proteomics Initiative in silico proteomics
medicinal chemistry
physiological proteomics
protein-DNA interaction methods
protein chips
proteomics
structural chemogenomics
suspension arrays
tissue biochips/microarrays
toxicogenomics




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